Please use this identifier to cite or link to this item: https://swslhd.intersearch.com.au/swslhdjspui/handle/1/8087
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dc.contributor.authorMin, H.-
dc.contributor.authorDowling, J.-
dc.contributor.authorJameson, M. G.-
dc.contributor.authorCloak, K.-
dc.contributor.authorFaustino, J.-
dc.contributor.authorSidhom, M.-
dc.contributor.authorMartin, J.-
dc.contributor.authorEbert, M. A.-
dc.contributor.authorHaworth, A.-
dc.contributor.authorChlap, P.-
dc.contributor.authorDe Leon, J.-
dc.contributor.authorBerry, M.-
dc.contributor.authorPryor, D.-
dc.contributor.authorGreer, P.-
dc.contributor.authorVinod, S. K.-
dc.contributor.authorHolloway, L.-
dc.date.accessioned2023-04-26T23:34:58Z-
dc.date.available2023-04-26T23:34:58Z-
dc.date.issued2021-
dc.identifier.urihttps://swslhd.intersearch.com.au/swslhdjspui/handle/1/8087-
dc.description.abstractVolume delineation quality assurance (QA) is particularly important in clinical trial settings where consistent protocol implementation is required, as outcomes will affect future as well current patients. Currently, where feasible, this is conducted manually, which is time consuming and resource intensive. Although previous studies mostly focused on automating delineation QA on CT, magnetic resonance imaging (MRI) is being increasingly used in radiotherapy treatment. In this work, we propose to perform automatic delineation QA on prostate MRI for both the clinical target volume (CTV) and organs-at-risk (OARs) by using delineations generated by 3D Unet variants as benchmarks for QA. These networks were trained on a small gold standard atlas set and applied on a multicentre radiotherapy clinical trial dataset to generate benchmark delineations. Then, a QA stage was designed to recommend 'pass', 'minor correction' and 'major correction' for each manual delineation in the trial set by thresholding its Dice similarity coefficient to the network generated delineation. Among all 3D Unet variants explored, the Unet with anatomical gates in an AtlasNet architecture performed the best in delineation QA, achieving an area under the receiver operating characteristics curve of 0.97, 0.92, 0.89 and 0.97 for identifying unacceptable (major correction) delineations with a sensitivity of 0.93, 0.73, 0.74 and 0.90 at a specificity of 0.93, 0.86, 0.86 and 0.95 for bladder, prostate CTV, rectum and gel spacer respectively. To the best of our knowledge, this is the first study to propose automated delineation QA for a multicentre radiotherapy clinical trial with treatment planning MRI. The methods proposed in this work can potentially improve the accuracy and consistency of CTV and OAR delineation in radiotherapy treatment planning. ? 2021 Institute of Physics and Engineering in Medicine.-
dc.subjectdeep learning delineation quality assurance MRI multicentre clinical trial radiotherapy-
dc.titleAutomatic radiotherapy delineation quality assurance on prostate MRI with deep learning in a multicentre clinical trial-
dc.typeJournal Article-
dc.contributor.swslhdauthorFaustino, Joselle-
dc.contributor.swslhdauthorSidhom, Mark-
dc.contributor.swslhdauthorChlap, Phillip-
dc.contributor.swslhdauthorBerry, Megan-
dc.contributor.swslhdauthorVinod, Shalini K.-
dc.contributor.swslhdauthorHolloway, Lois-
dc.description.affiliatesCSIRO Australian E-Health Research Centre, Herston, QLD, Australia Ingham Institute for Applied Medical Research, Sydney, NSW, Australia South Western Clinical School, University of New South Wales, Australia Centre for Medical Radiation Physics, University of WollongongNSW, Australia Institute of Medical Physics, University of SydneyNSW, Australia School of Mathematical and Physical Sciences, University of NewcastleNSW, Australia St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Australia GenesisCare, Sydney, NSW, Australia Liverpool and Macarthur Cancer Therapy Centres, Liverpool HospitalNSW, Australia Department of Radiation Oncology, Calvary Mater Newcastle, Newcastle, NSW, Australia Department of Radiation Oncology, Sir Charles Gairdner Hospital, Nedlands, WA, Australia School of Physics Mathematics and Computing, University of Western Australia, Perth, WA, Australia Illawarra Cancer Care Centre, Wollongong, Australia Princess Alexandra Hospital, Brisbane, QLD, Australia-
dc.identifier.doi10.1088/1361-6560/ac25d5-
dc.identifier.departmentLiverpool Hospital, Cancer therapy Centre-
dc.type.studyortrialArticle-
dc.identifier.journaltitlePhysics in Medicine and Biology-
Appears in Collections:Liverpool Hospital

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